STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MS4A12Membrane spanning 4-domains A12. (217 aa)    
Predicted Functional Partners:
MS4A5
Membrane spanning 4-domains A5.
      
 0.862
TMEM176A
Uncharacterized protein.
   
  
 0.836
NAPSA
Napsin A aspartic peptidase; Belongs to the peptidase A1 family.
      
 0.700
SCGB1D2
Secretoglobin family 1D member 2.
      
 0.689
MS4A6A
Membrane spanning 4-domains A6A.
   
  
 0.660
PASD1
PAS domain containing repressor 1.
   
  
 0.624
APOL6
Apolipoprotein L6.
      
 0.589
TSPAN8
Tetraspanin.
      
 0.560
MUC13
Mucin 13, cell surface associated.
      
 0.505
PTPRC
Protein tyrosine phosphatase receptor type C.
   
  
 0.493
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.