STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL34Kelch like family member 34. (645 aa)    
Predicted Functional Partners:
CUL3
Cullin-3 isoform 1; Belongs to the cullin family.
    
 0.722
HTATSF1
HIV-1 Tat specific factor 1.
      
 0.715
SMPX
Small muscle protein X-linked.
   
  
 0.658
HELB
DNA helicase B.
      
 0.620
TMEM192
Transmembrane protein 192.
    
 0.612
KLHL13
Kelch like family member 13.
    
0.600
PSMA4
Proteasome subunit alpha type.
    
 0.596
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 
 0.572
ELFN1
Extracellular leucine rich repeat and fibronectin type III domain containing 1.
     
 0.521
APBA2
Amyloid beta precursor protein binding family A member 2.
   
  
 0.515
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.