STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCTEX1D1Tctex1 domain containing 1. (179 aa)    
Predicted Functional Partners:
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.722
DYNLL2
Dynein light chain.
    
 0.719
DYNC1I1
Cytoplasmic dynein 1 intermediate chain 1 isoform a.
    
 0.710
DYNLRB2
Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
   
 0.710
WDR60
WD repeat-containing protein 60.
    
 0.700
WDR78
WD repeat domain 78.
    
 0.685
GTF2A1
Transcription initiation factor IIA subunit 1 isoform 1.
      
 0.644
DNAL4
Dynein light chain.
    
 0.632
DYNLT1
Uncharacterized protein.
    
 
 0.632
WDR34
WD repeat domain 34.
    
 0.623
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.