STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUPR1Nuclear protein 1 isoform b. (82 aa)    
Predicted Functional Partners:
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.570
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.549
SH3RF3
SH3 domain containing ring finger 3.
    
 
 0.518
KDM3A
Lysine-specific demethylase 3A.
      
 0.477
TNP1
Spermatid nuclear transition protein 1.
      
 0.475
IL18R1
Interleukin-18 receptor 1.
      
 0.474
POLR2G
Uncharacterized protein.
      
 0.467
RNF122
RING finger protein 122.
      
 0.461
HMMR
Hyaluronan mediated motility receptor.
    
 
 0.450
TCL1B
T cell leukemia/lymphoma 1B.
      
 0.448
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.