STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAPRE1Microtubule associated protein RP/EB family member 1. (301 aa)    
Predicted Functional Partners:
DCTN1
CAP-Gly domain-containing protein.
   
 
 0.824
CKAP5
Cytoskeleton-associated protein 5 isoform a.
   
 
 0.785
DST
Dystonin.
    
 
 0.772
MAPRE3
Microtubule-associated protein RP/EB family member 3.
  
 
  
0.762
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.761
BUB3
Mitotic checkpoint protein BUB3 isoform a.
   
 0.698
CLIP1
CAP-Gly domain-containing linker protein 1 isoform c.
    
 
 0.681
BUB1B
Uncharacterized protein.
   
 0.652
TUBA1C
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.648
LMNA
Uncharacterized protein; Belongs to the intermediate filament family.
    
 
 0.634
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.