STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPDC2Uncharacterized protein. (368 aa)    
Predicted Functional Partners:
TMEM161A
Transmembrane protein 161A isoform 1.
      
 0.644
CTNNA3
Catenin alpha 3.
   
  
 0.635
RHBDD1
Rhomboid domain containing 1.
    
 
 0.587
KLHL31
Kelch like family member 31.
   
  
 0.576
TMEM214
Transmembrane protein 214 isoform 1.
      
 0.572
TMEM70
Uncharacterized protein.
      
 0.557
COX18
Cytochrome c oxidase assembly factor COX18.
      
 0.509
OBSCN
Obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF.
   
  
 0.472
SLC12A7
AA_permease domain-containing protein.
    
 
 0.471
DSC1
Desmocollin-2 isoform Dsc2a preproprotein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
      
 0.465
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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