STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSTM1Osteopetrosis associated transmembrane protein 1 (Predicted). (334 aa)    
Predicted Functional Partners:
CLCN7
Chloride channel protein.
   
 0.985
CLCN6
Chloride channel protein.
   
 0.945
CLCNKA
Chloride channel protein.
   
 0.840
CLCN5
Chloride channel protein.
   
 0.725
CLCN3
Chloride channel protein.
   
 0.706
QPCTL
Glutaminyl-peptide cyclotransferase like.
   
  
 0.670
CLCN4
Chloride channel protein.
   
 0.658
TMED6
Transmembrane emp24 domain-containing protein 6.
   
  
 0.653
SEC63
Translocation protein SEC63 homolog.
      
 0.646
CLCN1
Chloride channel protein.
   
 0.645
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.