STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000058835Ig-like domain-containing protein. (116 aa)    
Predicted Functional Partners:
TRAV22
T cell receptor alpha variable 22.
  
 0.804
IGHE
Immunoglobulin heavy constant epsilon.
   
 0.715
JCHAIN
Uncharacterized protein.
   
 0.612
IGHM
Immunoglobulin heavy constant mu.
  
 0.551
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
    
 0.529
RPA2
RPA_C domain-containing protein.
    
 0.529
ENSCJAP00000073535
RPA_C domain-containing protein.
    
 0.529
PLAU
Plasminogen activator, urokinase.
    
  0.494
PLAT
Plasminogen activator; Belongs to the peptidase S1 family.
    
  0.494
MCL1
Induced myeloid leukemia cell differentiation protein Mcl-1 isoform 1.
    
 
 0.482
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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