STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RXYLT1Transmembrane protein 5. (443 aa)    
Predicted Functional Partners:
B4GAT1
Beta-1,4-glucuronyltransferase 1.
   
 
 0.963
FKRP
Fukutin-related protein.
     
 0.962
POMK
Protein kinase-like protein SgK196.
      
 0.862
POMT1
Protein O-mannosyltransferase 1.
   
  
 0.792
CRPPA
Isoprenoid synthase domain-containing protein isoform a.
  
   
 0.784
LARGE1
LARGE xylosyl- and glucuronyltransferase 1.
  
  
 0.784
FKTN
Fukutin isoform a.
  
 
 0.747
POMT2
Protein O-mannosyltransferase 2.
   
  
 0.656
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
   
  
 0.650
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.645
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.