STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELF5Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
GATA3
GATA binding protein 3.
   
  
 0.647
TEAD4
Transcriptional enhancer factor TEF-3; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis.
      
 0.644
EOMES
Eomesodermin.
      
 0.644
CDX2
Caudal type homeobox 2.
      
 0.642
MED23
Mediator complex subunit 23.
   
 
 0.629
GCM1
Glial cells missing transcription factor 1.
      
 0.604
KRT7
Keratin 7; Belongs to the intermediate filament family.
    
 
 0.583
CSN1S1
Casein alpha s1.
   
  
 0.581
TFAP2C
Transcription factor AP-2 gamma.
   
  
 0.565
SPINT1
Serine peptidase inhibitor, Kunitz type 1.
   
 
 0.528
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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