STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB42Erythrocyte membrane protein band 4.2. (721 aa)    
Predicted Functional Partners:
SLC4A1
Anion exchange protein.
   
 
 0.990
AHSP
Alpha-hemoglobin-stabilizing protein.
   
  
 0.933
RHAG
Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.898
ANK1
Ankyrin 1.
   
 0.883
ALAS2
5-aminolevulinate synthase.
   
  
 0.741
KLF1
Kruppel like factor 1.
   
 
 0.740
SPTA1
Spectrin alpha, erythrocytic 1.
   
 
 0.722
GYPA
Glycophorin.
   
 
 0.698
TMOD1
Tropomodulin 1.
   
  
 0.691
RHCE
Ammonium_transp domain-containing protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.690
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.