STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF15DDB1 and CUL4 associated factor 15. (717 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.960
RBM39
RNA binding motif protein 39.
    
 
 0.938
DDA1
DET1 and DDB1 associated 1.
    
 
 0.899
RBM23
RNA binding motif protein 23.
    
 
 0.785
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.740
VPRBP
DDB1 and CUL4 associated factor 1.
    
 0.533
DCAF10
DDB1-and CUL4-associated factor 10.
     
 0.509
DCAF16
DDB1-and CUL4-associated factor 16.
     
 0.502
CISD3
CDGSH iron-sulfur domain-containing protein 3, mitochondrial.
   
  
 0.495
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 
 0.494
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.