STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2L6Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin-like domain-containing protein.
   
 0.982
PRKN
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.980
LOC100411827
Ubiquitin-like domain-containing protein.
   
 0.975
ENSCJAP00000052511
Ubiquitin-like domain-containing protein.
   
 0.960
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.959
LOC100385218
Ubiquitin-like domain-containing protein.
   
 0.959
UBA7
Ubiquitin-like modifier-activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
   
 0.915
UBE2L3-2
Ubiquitin-conjugating enzyme E2 L3 isoform 1; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.914
ISG15
ISG15 ubiquitin like modifier.
   
 0.905
ENSCJAP00000068236
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.885
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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