STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO2-aminoethanethiol dioxygenase. (270 aa)    
Predicted Functional Partners:
CSAD
Cysteine sulfinic acid decarboxylase.
     
 0.931
GADL1
Glutamate decarboxylase like 1.
     
 0.924
GAD1
Glutamate decarboxylase 1.
     
 0.914
GAD2
Glutamate decarboxylase 2.
     
 0.911
SCRN3
Secernin 3.
      
 0.779
OGA
Uncharacterized protein.
      
 0.770
CDO1
Cysteine dioxygenase.
      
 0.645
ALKBH1
Alkylated DNA repair protein alkB homolog 1.
   
  
 0.568
LOC100390933
Cytochrome c oxidase copper chaperone.
      
 0.565
METAP1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
      
 0.516
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.