STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100398205-2Histone H3.1. (136 aa)    
Predicted Functional Partners:
KDM6B
Lysine-specific demethylase 6B.
   
 0.826
KDM6A
Lysine demethylase 6A.
   
 0.826
MBD1
Uncharacterized protein.
    
 0.792
ATRX
Uncharacterized protein.
    
 0.725
ARID4A
AT-rich interactive domain-containing protein 4A isoform I.
   
 0.720
ARID4B
AT-rich interaction domain 4B.
   
 0.720
LOC100394455
Histone H3; Belongs to the histone H3 family.
  
 
0.673
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.668
RBBP5
Uncharacterized protein.
    
 0.655
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.652
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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