STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC96DUF4201 domain-containing protein. (552 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interactive domain-containing protein 4A isoform I.
    
 0.861
ARID4B
AT-rich interaction domain 4B.
    
 0.861
SIN3A
SIN3 transcription regulator family member A.
   
 0.675
SIN3B
SIN3 transcription regulator family member B.
   
 0.675
C9orf116
Chromosome 9 open reading frame 116.
   
  
 0.637
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.597
WDR73
WD repeat domain 73.
   
 0.597
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.597
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.597
ARMC3
Armadillo repeat containing 3.
   
  
 0.580
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.