STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST8SIA1ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family. (356 aa)    
Predicted Functional Partners:
ZFP90
ZFP90 zinc finger protein.
      
 0.770
RHOBTB3
Rho-related BTB domain-containing protein 3.
   
  
 0.753
SVOPL
SVOP like.
      
 0.644
COL26A1
Collagen type XXVI alpha 1 chain.
      
 0.620
ST3GAL5
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.580
RNF123
E3 ubiquitin-protein ligase RNF123.
    
 
 0.575
MCCC1
Methylcrotonoyl-CoA carboxylase 1.
      
 0.570
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
      
 0.568
CASD1
CAS1 domain containing 1.
      
 0.543
SORD
Sorbitol dehydrogenase.
      
 0.499
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.