STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDDM3BEpididymal protein 3B. (203 aa)    
Predicted Functional Partners:
WFDC11
WAP four-disulfide core domain 11.
      
 0.702
WFDC9
WAP four-disulfide core domain 9.
      
 0.702
LCN8
Lipocalin 8; Belongs to the calycin superfamily. Lipocalin family.
      
 0.689
WFDC2
WAP four-disulfide core domain 2.
      
 0.645
HEXA
Beta-hexosaminidase.
      
 0.620
DEFB129
Defensin beta 129.
      
 0.620
DEFB119
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.620
HEXB
Beta-hexosaminidase.
      
 0.586
CA8
Carbonic anhydrase-related protein; Belongs to the alpha-carbonic anhydrase family.
      
 0.568
ADGRG2
Adhesion G protein-coupled receptor G2; Belongs to the G-protein coupled receptor 2 family.
      
 0.441
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.