STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSMF1Proteasome inhibitor PI31 subunit. (271 aa)    
Predicted Functional Partners:
FBXO7
F-box domain-containing protein.
   
 0.863
ENSCJAP00000076289
F-box domain-containing protein.
   
 0.863
PSMB7
Proteasome subunit beta.
   
 0.846
PSMA1
Proteasome subunit alpha type.
   
 0.835
UFD1
Uncharacterized protein.
    
 0.820
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.816
PSMB1
Proteasome subunit beta.
    
 0.799
PSMB10
Proteasome subunit beta.
   
 0.789
PSMA4
Proteasome subunit alpha type.
    
 0.773
PSMA7
Proteasome subunit alpha type.
   
 0.760
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.