STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABRAActin-binding Rho-activating protein. (377 aa)    
Predicted Functional Partners:
ABLIM3
Uncharacterized protein.
    
 
 0.606
MYOZ2
Myozenin-2.
   
    0.584
ABLIM1
Actin binding LIM protein 1.
    
 
 0.542
ENSCJAP00000063502
Actin binding LIM protein family member 2.
    
 
 0.493
ENSCJAP00000071495
LIM zinc-binding domain-containing protein.
    
 
 0.493
POFUT2
Uncharacterized protein.
      
 0.469
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
  
 0.454
SNTG1
Gamma-1-syntrophin.
   
  
 0.435
ANKRD2
Ankyrin repeat domain 2.
   
  
 0.421
LMOD2
WH2 domain-containing protein.
   
   0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.