STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA6Carbonic anhydrase 6; Belongs to the alpha-carbonic anhydrase family. (318 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.621
SLC4A2
Anion exchange protein.
   
 
 0.616
WDR72
WD repeat domain 72.
      
 0.563
FAM83H
Family with sequence similarity 83 member H.
      
 0.563
C6orf58
Chromosome 6 open reading frame 58.
   
  
 0.554
CHST8
Carbohydrate sulfotransferase.
   
  
 0.537
SLC2A5
Solute carrier family 2 member 5; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.533
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.522
CHST9
Carbohydrate sulfotransferase.
   
  
 0.522
ENSCJAP00000053296
Uncharacterized protein.
    
 
 0.519
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.