STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000062117Cholinergic receptor nicotinic alpha 1 subunit. (494 aa)    
Predicted Functional Partners:
CHRNB1
Cholinergic receptor nicotinic beta 1 subunit.
  
0.910
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
  
0.861
CHRND
Uncharacterized protein.
  
0.861
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
0.852
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
0.846
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
  
0.829
CHRNB4
Cholinergic receptor nicotinic beta 4 subunit.
  
0.826
CHRNB2
Neuronal acetylcholine receptor subunit beta-2.
  
0.820
CHRNA3
Cholinergic receptor nicotinic alpha 3 subunit.
  
0.799
CHRNB3
Neuronal acetylcholine receptor subunit beta-3.
  
0.792
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.