STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000062168Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
UBL5
Ubiquitin-like protein 5.
   
    0.628
SUB1
SUB1 regulator of transcription.
   
    0.582
F7I685_CALJA
Ubiquitin-like domain-containing protein.
   
    0.576
NEDD8
Ubiquitin-like domain-containing protein.
   
    0.576
ENSCJAP00000062908
Uncharacterized protein.
   
    0.465
POMP
Proteasome maturation protein.
   
    0.456
ENSCJAP00000071751
Uncharacterized protein.
   
    0.456
ENSCJAP00000077859
Uncharacterized protein.
   
    0.456
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
  
 0.453
COX7A2
Cytochrome c oxidase subunit 7A2, mitochondrial.
   
    0.441
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.