STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHG1Pleckstrin homology and RhoGEF domain containing G1. (1385 aa)    
Predicted Functional Partners:
NOS1AP
PID domain-containing protein.
      
 0.646
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
 0.621
RAB29
Solute carrier family 41 member 1.
      
 0.606
AGMAT
Agmatinase; Belongs to the arginase family.
      
 0.581
PRSS21
Serine protease 21; Belongs to the peptidase S1 family.
      
 0.580
RFC3
Replication factor C subunit 3 isoform 1.
      
 0.566
SLC16A6
Solute carrier family 16 member 6.
      
 0.565
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
      
 0.564
DYNC1I1
Cytoplasmic dynein 1 intermediate chain 1 isoform a.
      
 0.563
IYD
Nitroreductase domain-containing protein.
      
 0.563
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.