STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCP2Purkinje cell protein 2. (136 aa)    
Predicted Functional Partners:
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.646
GABRA6
Gamma-aminobutyric acid type A receptor alpha6 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.619
KCNC3
Potassium voltage-gated channel subfamily C member 3; Belongs to the potassium channel family.
   
  
 0.618
RPRM
Reprimo, TP53 dependent G2 arrest mediator homolog.
      
 0.580
PET100
PET100 cytochrome c oxidase chaperone.
      
 0.569
MCEMP1
Mast cell expressed membrane protein 1.
      
 0.567
GNAT3
G protein subunit alpha transducin 3.
   
 0.556
PGRMC1
Progesterone receptor membrane component 1; Belongs to the cytochrome b5 family.
      
 0.501
ATXN1L
Ataxin-1-like.
   
  
 0.492
GNAT2
G protein subunit alpha transducin 2.
   
 0.491
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.