STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1939S ribosomal protein L19, mitochondrial. (292 aa)    
Predicted Functional Partners:
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 
 0.999
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.998
RPL35
Ribosomal protein L35.
   
 
 0.998
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.998
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.998
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.998
MRPL9
Mitochondrial ribosomal protein L9 (Predicted).
   
 
 0.998
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.998
MRPS6
28S ribosomal protein S6, mitochondrial.
   
 
 0.998
MRPL20
Mitochondrial ribosomal protein L20.
  
 
 0.998
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.