STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTYH1Protein tweety homolog; Probable chloride channel; Belongs to the tweety family. (460 aa)    
Predicted Functional Partners:
LENG8
Leukocyte receptor cluster member 8 (Predicted).
      
 0.903
CDC42EP5
CDC42 effector protein 5 (Predicted).
      
 0.903
LOC100403511
Golgi pH regulator A isoform 1.
      
 0.805
VSTM1
V-set and transmembrane domain containing 1.
      
 0.664
FCAR
Fc fragment of IgA receptor.
      
 0.662
UNK
RING finger protein unkempt homolog.
      
 0.653
AQP6
Aquaporin 6; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.638
BEST1
Bestrophin; Forms calcium-sensitive chloride channels. Permeable to bicarbonate; Belongs to the bestrophin family.
      
 0.520
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
      
 0.518
ALCAM
Uncharacterized protein.
      
 0.495
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.