STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NNATUncharacterized protein. (125 aa)    
Predicted Functional Partners:
BLCAP
BLCAP apoptosis inducing factor.
      
 0.785
SGCE
Sarcoglycan epsilon.
      
 0.647
IBSP
Integrin binding sialoprotein.
      
 0.575
PLAGL1
Zinc finger protein PLAGL1 isoform 2.
   
  
 0.535
PWWP3B
PWWP domain containing 3B.
      
 0.527
ZNF445
Zinc finger protein 445.
      
 0.513
MEST
AB hydrolase-1 domain-containing protein.
      
 0.510
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
      
 0.504
ASB4
Ankyrin repeat and SOCS box containing 4.
      
 0.483
IGF2
Insulin like growth factor 2.
      
 0.480
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.