STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000064265Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
ENSCJAP00000067141
Uncharacterized protein.
 
      0.898
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog.
   
 
 0.863
CHMP2A
Charged multivesicular body protein 2A.
    
 0.857
CHMP1A
Charged multivesicular body protein 1A.
    
 
 0.853
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.852
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.849
CHMP3
Uncharacterized protein.
    
 0.842
CHMP4C
Charged multivesicular body protein 4C.
    
 0.789
CHMP4B
Charged multivesicular body protein 4B.
    
 0.789
CHMP6
Charged multivesicular body protein 6.
    
 0.781
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.