STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOLD1Apolipoprotein L domain containing 1. (275 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.797
CD300LG
CD300 molecule like family member g.
     
 0.620
UNC80
Unc-80 homolog, NALCN channel complex subunit.
    
 0.610
FGF12
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.580
VSNL1
Visinin like 1.
    
 
 0.577
DSG2
Desmoglein-2 preproprotein.
  
   
 0.573
APOL6
Apolipoprotein L6.
      
 0.569
BICC1
BicC family RNA binding protein 1.
      
 0.547
SLC35F1
Solute carrier family 35 member F1.
      
 0.531
RYR3
Ryanodine receptor 3.
      
 0.530
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.