STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100413974Uncharacterized protein. (57 aa)    
Predicted Functional Partners:
COA3
Cytochrome C oxidase assembly factor 3 homolog, mitochondrial.
   
 
 0.770
COX5B
Cytochrome c oxidase subunit 5B.
   
 
 0.652
HIGD2A
HIG1 domain family member 2A.
   
  
 0.630
ENSCJAP00000074250
HIG1 domain-containing protein.
   
  
 0.630
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
  
 0.559
LOC100895863
Cytochrome b-c1 complex subunit 10.
   
  
 0.552
UQCRQ
Ubiquinol-cytochrome c reductase complex III subunit VII.
   
  
 0.542
NDUFB8
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.539
UQCR10
Cytochrome b-c1 complex subunit 9 isoform a.
   
    0.485
NDUFS5
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5.
   
    0.485
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.