STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YKT6Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family. (198 aa)    
Predicted Functional Partners:
STX7
Syntaxin 7 (Predicted); Belongs to the syntaxin family.
   
 0.998
STX5
Syntaxin-5 isoform 1; Belongs to the syntaxin family.
    
 0.998
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.997
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.997
BET1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.995
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.995
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
    
 0.990
STX8
Syntaxin 8.
    
 0.988
VTI1B
t-SNARE coiled-coil homology domain-containing protein.
    
 0.986
SEC22A
SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.
    
 0.978
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.