STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGDIBRho GDP dissociation inhibitor beta. (201 aa)    
Predicted Functional Partners:
RHOA
Transforming protein RhoA.
   
 0.976
PRKACB
cAMP-dependent protein kinase catalytic subunit beta isoform 1; Belongs to the protein kinase superfamily.
   
 
 0.915
PRKACA
cAMP-dependent protein kinase catalytic subunit alpha isoform 1; Belongs to the protein kinase superfamily.
   
 
 0.915
LOC100408115
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
 0.915
PRKACG
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
 0.915
ARHGDIG
Rho GDP dissociation inhibitor gamma.
  
  
 
0.914
NGFR
Nerve growth factor receptor.
   
 
  0.906
ARHGDIA-2
Uncharacterized protein.
  
  
 
0.901
RAC3
Ras-related C3 botulinum toxin substrate 3.
   
 0.805
RAC1
Ras-related C3 botulinum toxin substrate 1 isoform Rac1b.
   
 0.805
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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