STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POGKPogo transposable element derived with KRAB domain. (609 aa)    
Predicted Functional Partners:
UCK2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 
 0.646
TIGD3
Tigger transposable element derived 3.
      
 0.557
TIGD7
Tigger transposable element derived 7.
      
 0.556
TIGD5
Tigger transposable element derived 5.
      
 0.556
MRPL30
39S ribosomal protein L30, mitochondrial.
      
 0.555
AKAP17A
A-kinase anchoring protein 17A.
      
 0.554
PGBD1
PiggyBac transposable element-derived protein 1.
      
 0.520
ILDR1
Immunoglobulin like domain containing receptor 1.
      
 0.518
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.516
NSUN7
NOP2/Sun RNA methyltransferase family member 7; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.515
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.