STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000065919LisH domain-containing protein. (146 aa)    
Predicted Functional Partners:
ENSCJAP00000071179
Uncharacterized protein.
 
     0.917
PLK1
Serine/threonine-protein kinase PLK.
   
 0.644
PCM1
Pericentriolar material 1.
   
 
 0.529
PLK3
Serine/threonine-protein kinase PLK.
   
 0.491
PLK2
Serine/threonine-protein kinase PLK.
   
 0.491
FOPNL
FGFR1OP N-terminal like.
   
 
 0.452
ARL13B
ADP ribosylation factor like GTPase 13B.
   
 
 0.448
SDCCAG8
Uncharacterized protein.
    
 
 0.439
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.435
NDE1
NudE neurodevelopment protein 1.
    
 
 0.412
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.