STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPH1Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform 1.
    
 
 0.782
HNRNPD
Heterogeneous nuclear ribonucleoprotein D0 isoform a.
   
 0.727
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform a.
   
 0.686
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B isoform a.
   
 0.675
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.668
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.649
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
 0.648
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.648
SRSF6
Serine/arginine-rich splicing factor 6.
   
 0.630
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a.
   
 0.625
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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