STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C22orf39Chromosome 22 open reading frame 39. (136 aa)    
Predicted Functional Partners:
PXK
PX domain containing serine/threonine kinase like.
      
 0.777
NADK
NAD kinase.
     
 0.729
RUBCN
Rubicon autophagy regulator.
      
 0.725
XCL1
SCY domain-containing protein.
    
 0.522
IRF2
Interferon regulatory factor.
    
 0.487
GNB1L
Guanine nucleotide-binding protein subunit beta-like protein 1.
    
 0.483
PI4KB
Phosphatidylinositol 4-kinase beta; Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol- 1,4,5,-trisphosphate (PIP). May regulate Golgi disintegration/reorganization during mitosis, possibly via its phosphorylation (By similarity). Involved in Golgi-to-plasma membrane trafficking (By similarity).
      
 0.448
CCND3
G1/S-specific cyclin-D3 isoform 2; Belongs to the cyclin family.
      
 0.448
ISG20
Interferon stimulated exonuclease gene 20.
    
 
 0.442
C1R
Complement C1r; Belongs to the peptidase S1 family.
    
 
 0.436
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.