STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG2BAutophagy-related protein 2 homolog B. (2078 aa)    
Predicted Functional Partners:
WIPI1
WD repeat domain phosphoinositide-interacting protein 1.
    
 0.986
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.986
ATG2A
Autophagy related 2A.
  
 
0.927
WDR45
Uncharacterized protein.
    
 
 0.913
ATG9B
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 
 0.849
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.834
ATG16L2
Autophagy related 16 like 2.
      
 0.806
WIPI2
WD repeat domain, phosphoinositide interacting 2.
    
 
 0.790
ATG10
Autophagy related 10.
      
 0.752
ATG101
Autophagy-related protein 101.
      
 0.751
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.