STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX1Iroquois homeobox 1. (480 aa)    
Predicted Functional Partners:
DLX2
Distal-less homeobox 2.
   
 
 0.614
IRX2
Iroquois homeobox 2.
   
  
0.570
HHEX
Hematopoietically-expressed homeobox protein HHEX.
   
 
 0.562
FOXP1
Fork-head domain-containing protein.
      
 0.546
CLK4
CDC like kinase 4; Belongs to the protein kinase superfamily.
   
  
 0.543
DLX1
Homeobox protein DLX-1 isoform 1.
   
 
 0.539
HOXA6
Homeobox A6.
   
 0.528
TSHZ1
Teashirt zinc finger homeobox 1.
   
 0.528
ISLR2
Immunoglobulin superfamily containing leucine rich repeat 2.
   
  
 0.526
POU4F1
POU domain protein.
   
  
 0.521
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.