STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPEPL1Putative aminopeptidase NPEPL1 isoform 1. (523 aa)    
Predicted Functional Partners:
RNF145
Ring finger protein 145.
      
 0.638
PRPF19
Pre-mRNA-processing factor 19.
   
 
 0.605
STX16
Syntaxin 16; Belongs to the syntaxin family.
 
 
  
 0.574
USP39
U4/U6.U5 tri-snRNP-associated protein 2 isoform 1.
      
 0.565
ZSCAN26
Zinc finger and SCAN domain containing 26.
     
 0.557
RIPOR2
RHO family interacting cell polarization regulator 2.
      
 0.547
HIPK3
Homeodomain-interacting protein kinase 3 isoform 1.
    
 
 0.531
C20orf85
Chromosome 20 open reading frame 85.
      
 0.516
NCOA5
Nuclear receptor coactivator 5.
      
 0.509
LOC100395443
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
  0.463
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.