STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX7Regulatory factor X7. (1461 aa)    
Predicted Functional Partners:
RFXAP
Regulatory factor X associated protein.
    
 
 0.866
RFXANK
Regulatory factor X associated ankyrin containing protein.
   
 
 0.859
CCNK
Cyclin K; Belongs to the cyclin family.
   
  
 0.820
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
      
 0.785
DTX1
Deltex E3 ubiquitin ligase 1.
    
 
 0.724
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.654
CHEK2
Uncharacterized protein.
   
 
 0.576
TM7SF3
Transmembrane 7 superfamily member 3.
   
  
 0.560
FAM89B
Family with sequence similarity 89 member B.
      
 0.554
CIITA
Class II major histocompatibility complex transactivator.
   
 
 0.498
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.