STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEGS1Sphingolipid delta(4)-desaturase DES1. (323 aa)    
Predicted Functional Partners:
CERS4
Ceramide synthase 4.
   
 0.983
UGCG
Ceramide glucosyltransferase.
   
 
 0.951
KDSR
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.947
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.943
CERS2
Ceramide synthase 2.
   
 0.943
CERS6
Ceramide synthase 6 isoform 1.
   
 0.940
CERS5
Ceramide synthase 5.
   
 0.933
SGMS1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
   
 
 0.933
ACER1
Uncharacterized protein.
   
 
 0.932
ASAH1
N-acylsphingosine amidohydrolase 1.
     
 0.931
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.