STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF9Membrane associated ring-CH-type finger 9. (346 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.599
ZNF593
Zinc finger protein 593.
      
 0.558
NEK11
NIMA related kinase 11.
      
 0.554
NEK9
Serine/threonine-protein kinase Nek9.
   
 0.528
MAP7D3
Uncharacterized protein.
   
  
 0.460
ENDOU
Uncharacterized protein.
      
 0.428
SPATA5L1
Spermatogenesis-associated protein 5-like protein 1.
    
 
 0.409
SPATA5
Spermatogenesis associated 5.
    
 
 0.409
IFFO1
Intermediate filament family orphan 1 isoform 5; Belongs to the intermediate filament family.
   
  
 0.409
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.409
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.