STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGDRProstaglandin D2 receptor. (359 aa)    
Predicted Functional Partners:
ZNF426
Zinc finger protein 426.
      
 0.620
CCDC88C
Coiled-coil domain containing 88C.
      
 0.620
TBC1D21
TBC1 domain family member 21.
      
 0.620
FBXL12
F-box/LRR-repeat protein 12.
      
 0.620
FAT3
FAT atypical cadherin 3.
      
 0.572
TINAGL1
Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family.
      
 0.566
PTGDR2
Prostaglandin D2 receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.545
PCYOX1
Prenylcysteine oxidase 1.
      
 0.537
PTGDS
Uncharacterized protein; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.517
AGTRAP
Type-1 angiotensin II receptor-associated protein isoform a.
    
 
 0.469
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.