STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP7Charged multivesicular body protein 7. (453 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C.
    
0.987
CHMP4B
Charged multivesicular body protein 4B.
    
0.987
CHMP6
Charged multivesicular body protein 6.
    
0.981
CHMP3
Uncharacterized protein.
   
 0.966
CHMP4A
Charged multivesicular body protein 4A.
    
 0.957
LEMD2
LEM domain containing 2.
     
 0.949
IST1
IST1 factor associated with ESCRT-III.
    
 0.943
CHMP2A
Charged multivesicular body protein 2A.
    
 0.941
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 
 0.929
VPS25
Vacuolar protein-sorting-associated protein 25.
    
 0.914
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.