STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000068083Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
BSDC1
BSD domain containing 1.
   
    0.596
TMBIM6
Uncharacterized protein; Belongs to the BI1 family.
   
  
 0.591
ENSCJAP00000068508
Uncharacterized protein; Belongs to the BI1 family.
   
  
 0.591
CBARP
CACN subunit beta associated regulatory protein.
      
 0.567
NR4A3
Nuclear receptor subfamily 4 group A member 3.
      
 0.566
EIF2B3
Translation initiation factor eIF-2B subunit gamma isoform 1.
      
 0.565
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.561
CLRN3
Clarin 3.
      
 0.561
SHOX2
Short stature homeobox 2.
      
 0.559
LY96
Lymphocyte antigen 96.
      
 0.558
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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