STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNIH3Cornichon family AMPA receptor auxiliary protein 3. (189 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.916
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 0.896
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.798
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
    
 
 0.768
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
 0.754
CACNG8
Voltage-dependent calcium channel gamma-8 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
   
 
 0.677
STX7
Syntaxin 7 (Predicted); Belongs to the syntaxin family.
    
 0.666
CDH8
Cadherin-8 preproprotein; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.631
ZBTB20
Zinc finger and BTB domain containing 20.
      
 0.628
CNIH4
Protein cornichon homolog 4.
  
  
0.600
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.