STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD2BP2CD2 cytoplasmic tail binding protein 2. (409 aa)    
Predicted Functional Partners:
DDX23
Putative ATP-dependent RNA helicase DDX23.
   
 0.989
PRPF6
Pre-mRNA-processing factor 6.
   
 0.937
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.919
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component isoform a.
    
 
 0.901
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 0.897
AAR2
AAR2 splicing factor.
   
 
 0.866
CD2
Uncharacterized protein.
    
 
 0.861
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 
 0.852
TXNL4B
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.849
ENSCJAP00000058691
SEC63 domain-containing protein.
   
 
 0.847
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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