STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN3Matrilin 3. (533 aa)    
Predicted Functional Partners:
COMP
Cartilage oligomeric matrix protein.
   
 0.812
LUM
Lumican.
   
 0.683
COL9A3
Collagen type IX alpha 3 chain.
   
 0.629
FRZB
Frizzled related protein.
    
 0.629
ASPN
Asporin.
   
 0.617
ACAN
Aggrecan.
   
 0.617
COL9A2
Collagen type IX alpha 2 chain.
   
 0.616
COL9A1
Collagen type IX alpha 1 chain.
   
 0.606
CRELD2
Cysteine rich with EGF like domains 2.
    
 0.581
CTDSP2
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2.
   
 
 0.574
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.