STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCJAP00000070070SH2 domain-containing protein. (195 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.654
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.527
RAB5B
Ras-related protein Rab-5B isoform 1.
    
 0.523
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
      
 0.472
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.460
GAPVD1
GTPase-activating protein and VPS9 domain-containing protein 1.
    
 0.454
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.441
RAB5C
Uncharacterized protein.
    
 0.419
ENSCJAP00000053783
Uncharacterized protein.
    
 0.419
RAB5A
RAB5A, member RAS oncogene family.
    
 0.419
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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